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giovedì 16 maggio 2024
# gst: apropos of avoidance, packing of stiff rods on ellipsoids; the effects of self-avoidance
sabato 9 aprile 2022
# phyto: weird, jazzy Nature, the 'transference of sexuality', 'some sexual consequences of being a plant'.
lunedì 31 gennaio 2022
# evol: the hypothesis of quasi-stochastic 'jazzy' metamechanics of biological evolution (in Arabidopsis thaliana)
lunedì 17 maggio 2021
# gst: modeling complex nanofibril-based (cell) walls to meet diverse (bio-physical) constraints.
giovedì 22 aprile 2021
# life: cascading effects of noise on plants
martedì 6 ottobre 2020
# zoo: Tatupa, a random genus name for fixing a rare species of tropical Heteroptera with long antennas
lunedì 28 settembre 2020
# life: oops! aprops of tsunami wave hazards, exposure to other 'Fukushima Daiichi Nuclear Power Plant' accidents appear to exist ...
martedì 30 giugno 2020
# gst: elastic instabilities, a morphing model to quickly trap anything (in 100msec), the Venus flytrap (Dionaea muscipula)
venerdì 29 novembre 2019
# gst: a bizarre extension of the Jelly Roll approach, the morphogenesis of the leaves (plant Utricularia gibba)
venerdì 23 agosto 2019
# evol: when the dinosaurs died, lichens thrived ...
AA << results imply that multiple historical events during the transition from Mesozoic to Cenozoic eras, including the K-Pg mass extinction event, impacted the evolutionary dynamics in lichen-forming fungi. >>
Jen-Pan Huang, Ekaphan Kraichak, et al. Accelerated diversifications in three diverse families of morphologically complex lichen-forming fungi link to major historical events. Scientific Reports. volume 9, Article number: 8518 (2019). https://www.nature.com/articles/s41598-019-44881-1
<< We thought that lichens would be affected negatively, but in the three groups we looked at, they seized the chance and diversified rapidly, (..) Some lichens grow sophisticated 3D structures like plant leaves, and these ones filled the niches of plants that died out. >> Jen-Pang Huang.
When the dinosaurs died, lichens thrived. Mass extinction hurt land plants, but DNA shows that some fungus/plant combo organisms rose up. Field Museum, Academia Sinica, Taipei. - ScienceDaily. Jun 28, 2019. https://www.sciencedaily.com/releases/2019/06/190628120432.htm
K-Pg mass extinction event https://en.m.wikipedia.org/wiki/Cretaceous%E2%80%93Paleogene_extinction_event
martedì 26 marzo 2019
# gst phyto: how cheaters are favored
<< Our data show that natural selection favors cheating rhizobia, and support predictions that rhizobia can often subvert plant defenses and evolve to exploit hosts, >> Joel Sachs.
<< The study (..) is the first to uncover cheater strains in natural populations and show how natural selection favors them. >>
Study finds natural selection favors cheaters. University of California - Riverside. Mar 19, 2019.
https://m.phys.org/news/2019-03-natural-favors-cheaters.html
<< Legumes have mechanisms to defend against rhizobia that fail to fix sufficient nitrogen, but these data support predictions that rhizobia can subvert plant defenses and evolve to exploit hosts. >>
Kelsey A. Gano‐Cohen, Camille E. Wendlandt, et al. Interspecific conflict and the evolution of ineffective rhizobia. Ecology Letters. Mar 18, 2019 doi: 10.1111/ele.13247
sabato 2 marzo 2019
# gst phyto: an evidence for alternative transient states
AA << have discovered that plant communities follow different trajectories when they adapt to dryer conditions than when they adapt to more frequently flooded conditions. Further, in two side studies in the same experiment they found that flooding history of the vegetation alter the response of germinating seeds and of litter decomposition to the current conditions. >>
<< This is one of the most direct experimental evidence to date for alternative transient states, >> Judith Sarneel.
Plant communities do not take the same route from A to B as from B to A. Umea University. Feb 25, 2019.
https://m.phys.org/news/2019-02-route.html
Judith M. Sarneel Maria Dolores Bejarano, et al. Local flooding history affects plant recruitment in riparian zones. Journal of Vegetation Science.
doi: 10.1111/jvs.12731 Feb 3, 2019
giovedì 14 febbraio 2019
# phyto: the fussy pollination scheme of the Joshua tree
<< the plants commonly known as Joshua trees include two distinct, sister-species of plant: Yucca brevifolia Engelm. and Yucca jaegeriana McKelvey, each pollinated by two sister-species of yucca moth Tegeticula synthetica Riley and Tegeticula antithetica Pellmyr, respectively. A number of studies have argued that the moths have coevolved with their hosts, producing a pattern of phenotype matching between moth ovipositor length and floral style length. >>
W.S. Cole, Jr. A.S. James, C.I. Smith. First recorded observations of pollination and oviposition behavior in Tegeticula antithetica (Lepidoptera: Prodoxidae) suggest a functional basis for coevolution with Joshua tree (Yucca) hosts. Annals of the Entomological Society of America. Vol. 110, July 2017, p. 390. doi: 10.1093/aesa/sax037.
https://academic.oup.com/aesa/article/110/4/390/3072239
<< To me [the flowers] smell kind of like mushrooms or ripe cantaloupe, >> Christopher Irwin Smith
Susan Milius. Shutdown aside, Joshua trees live an odd life. In the U.S. southwest, Joshua trees evolved a rare, fussy pollination scheme. Feb 6, 2019.
https://www.sciencenews.org/article/shutdown-aside-joshua-trees-live-odd-life
Also
giovedì 3 gennaio 2019
# phys: the strange world of quantum mechanics
<< In the normal world, an object such as a baseball can only be in one place at one time. But in the quantum world, a particle such as an electron can occupy an infinite number of places at the same time, existing in what physicists call a superposition of multiple states. >>
<< in the quantum world, two individual particles, such as photons can be entangled, such that the mere act of sensing one photon with a detector instantaneously forces the other photon, no matter how far away, to assume a particular state. >>
<< evidence is mounting from the world of plant physiology that some biological processes that rely on quantum superposition occur at normal temperatures, raising the possibility that unimaginably strange world of quantum mechanics may indeed intrude into the every day workings of other biological systems, such as our nervous systems. >>
<< Evolution, in its relentless quest to engineer the most energy-efficient life forms, appears to have ignored physicists’ belief that useful quantum effects can’t happen in the warm, wet environments of biology. >>
Eric Haseltine. Why You Should Care About Quantum Neuroscience.
Hints of an incredibly exciting future. Dec 31, 2018
FonT
davanti a una immagine di "enzima allosterico" qualsiasi bravo scientist sa immediatamente con cosa avra' a che fare: avra' a che fare con il caos, vale a dire con oggetti che possono generare dinamiche senz'altro confinate purtuttavia bizzarre, jazz, funky, fuzzy; invece davanti a concetti quali i due citati sopra (superposition, entanglement), e gli ipotetici effetti immaginabili all'interno di strutture biologiche, neurobiologiche, informatiche, ho idea che chiunque potrebbe sentirsi vagamente disorientato (qui si sottolinea "vagamente") ...
giovedì 13 dicembre 2018
# phyto: the benefits of being a plant in a patch (among Moricandia moricandioides)
<< Pollinators tend to be preferentially attracted to large floral displays that may comprise more than one plant in a patch. Attracting pollinators thus not only benefits individuals investing in advertising, but also other plants in a patch through a 'magnet' effect. >>
Ruben Torices, Jose M. Gomez, John R. Pannell. Kin discrimination allows plants to modify investment towards pollinator attraction. Nature Comm.Volume 9, Article number 2018. doi: 10.1038/s41467-018-04378-3. May 22, 2018.
https://www.nature.com/articles/s41467-018-04378-3
The social networks of flowers. CORDIS. Dec 11, 2018.
giovedì 27 settembre 2018
# evol: adaptability by genome duplications (A. kamchatica)
<< "With these results, we have demonstrated on a molecular-genetic level that genome duplications can positively affect the adaptability of organisms," says plant scientist Timothy Paape. The multiple gene copies enable the plant to assume advantageous mutations while keeping an original copy of important genes. >>
Genome duplication drives evolution of species. University of Zurich. Sep 25, 2018.
https://m.phys.org/news/2018-09-genome-duplication-evolution-species.html
Timothy Paape, Roman V. Briskine, et al. Patterns of polymorphism and selection in the subgenomes of the allopolyploid Arabidopsis kamchatica.
Nature Comm 9 3909 Sep 25, 2018
giovedì 23 agosto 2018
# phyto: a molecular compass to coordinate growth
<< Using this protein [protein BASL: Breaking of Asymmetry in the Stomatal Lineage] to detect the polarity field is like switching a light on in each cell across the tissue. It allows us to see that these cells all have a compass, pointing in the same direction across the leaf >>
<< In this way we will find out if, as we suspect, this molecular compass is a conserved mechanism in the development of plant shapes across the plant kingdom which could be co-opted in different ways by different branches of evolution. >> Catherine Mansfield.
Adrian Galvin. Leaves possess a molecular compass. John Innes Centre. Aug 21, 2018
https://m.phys.org/news/2018-08-molecular-compass.html
Catherine Mansfield, Jacob L. Newman, et al. Ectopic BASL Reveals Tissue Cell Polarity throughout Leaf Development in Arabidopsis thaliana. Current Biology. 28 (16): 2638-46.E4 Aug 20, 2018 doi: 10.1016/j.cub.2018.06.019
https://www.cell.com/current-biology/fulltext/S0960-9822(18)30810-8
giovedì 18 gennaio 2018
# behav: the self-medication poultice by orang-utans (Pongo pygmaeus)
<< Animals self-medicate using a variety of plant and arthropod secondary metabolites by either ingesting them or anointing them to their fur or skin apparently to repel ectoparasites and treat skin diseases >>
AA << document self-medication in the only Asian great ape, orang-utans (Pongo pygmaeus), and for the first time, to our knowledge, the external application of an anti-inflammatory agent in animals. The use of leaf extracts from Dracaena cantleyi by orang-utan has been observed on several occasions; rubbing a foamy mixture of saliva and leaf onto specific parts of the body. Interestingly, the local indigenous human population also use a poultice of these leaves for the relief of body pains >>
Morrogh-Bernard HC, Foitova I, et al. Self-medication by orang-utans (Pongo pygmaeus) using bioactive properties of Dracaena cantleyi. Scientific Reports. 2017; 7: 16653.
doi: 10.1038/s41598-017-16621-w.
Nov 30, 2017.
https://www.nature.com/articles/s41598-017-16621-w
Borneo Nature Foundation. Orangutans, like people, use medicinal plants to treat joint and muscle inflammation. Jan 10, 2018.
https://m.phys.org/news/2018-01-orangutans-people-medicinal-joint-muscle.html
lunedì 11 dicembre 2017
# evol-ethno: the fuzzy dispersal and interaction dynamics of ancient (early) nomads
AA << evaluate single versus multiple dispersal models and southern versus the northern dispersal routes across the Asian continent. They also review behavioral and environmental variability and how these may have affected modern human dispersals and interactions with indigenous populations >>
Christopher J. Bae, Katerina Douka, Michael D. Petraglia. On the origin of modern humans: Asian perspectives. Science. 2017; 358 (6368): eaai9067
doi: 10.1126/science.aai9067. Dec 8, 2017
http://science.sciencemag.org/content/358/6368/eaai9067
<< Homo sapiens reached distant parts of the Asian continent, as well as Near Oceania, much earlier than previously thought. Additionally, evidence that modern humans interbred with other hominins already present in Asia, such as Neanderthals and Denisovans, complicates the evolutionary history of our species >>
Revising the story of the dispersal of modern humans across Eurasia. Technological advances and multidisciplinary research teams are reshaping our understanding of when and how humans left Africa - and who they met along the way. Dec 7, 2017
http://www.shh.mpg.de/742617/human-dispersals-africa
https://www.sciencedaily.com/releases/2017/12/171207141724.htm
<< Climate is a key factor determining the types of vegetation that can grow in an ecosystem. By recreating the plant foods and habitat available at a given time, it is possible to learn about changes that occurred during important transitions in the evolution of humans >>
Marie DeNoia Aronsohn. The Way We Were: Climate and Human Evolution. Dec 1, 2017.
https://m.phys.org/news/2017-12-wereclimate-human-evolution.html
http://blogs.ei.columbia.edu/2017/12/01/the-way-we-were-climate-and-human-evolution/
venerdì 6 ottobre 2017
# evol: an ultra-rare survivor, the Malagasy striped whirligig beetle H. milloti
<< a whirligig beetle species, Heterogyrus milloti, inhabiting forest streams in southeastern Madagascar is the last survivor of a once dominant and widespread Mesozoic group. With a Late Triassic to Early Jurassic origin (226–187 Ma) it is the hitherto oldest dated endemic lineage of animal or plant on Madagascar >>
Grey T. Gustafson, Alexander A. Prokin, et al. Tip-dated phylogeny of whirligig beetles reveals ancient lineage surviving on Madagascar. Scientific Reports 2017; 7 (8619) doi: 10.1038/s41598-017-08403-1
https://www.nature.com/articles/s41598-017-08403-1
<< Even today, the ageless striped whirligig beetle keeps its own company, preferring to skitter atop the surface of out-of-the-way forest streams in southeastern Madagascar—not mixing with latecomers of the subfamily Gyrininae who have become the dominant whirligig beetles on Madagascar and abroad >>
Meet Madagascar's oldest animal lineage, a whirligig beetle with 206-million-year-old origins. Oct 4, 2017
https://m.phys.org/news/2017-10-madagascar-oldest-animal-lineage-whirligig.html