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sabato 5 aprile 2025

# gst: asymptotic scaling in a one-dimensional billiard

<< The emergence of power laws that govern the large-time dynamics of a one-dimensional billiard of N point particles is analysed. In the initial state, the resting particles are placed in the positive half-line x≥0 at equal distances. Their masses alternate between two distinct values. The dynamics is initialized by giving the leftmost particle a positive velocity. >>

<< Due to elastic inter-particle collisions the whole system gradually comes into motion, filling both right and left half-lines. As shown by S. Chakraborti, et al. (2022), an inherent feature of such a billiard is the emergence of two different modes: the shock wave that propagates in x≥0 and the splash region in x<0. >>

<< Moreover, the behaviour of the relevant observables is characterized by universal asymptotic power-law dependencies. In view of the finite size of the system and of finite observation times, these dependencies only start to acquire a universal character. To analyse them, (AA) set up molecular dynamics simulations using the concept of effective scaling exponents, familiar in the theory of continuous phase transitions. (They) present results for the effective exponents that govern the large-time behaviour of the shock-wave front, the number of collisions, the energies and momentum of different modes and analyse their tendency to approach corresponding universal values. >>️

<< A characteristic feature of the billiard problem (AA) have considered (..) is the lack of a priori randomness, neither in the distribution of masses nor in the inter-particle distances. Therefore, the emergence of the hydrodynamic power-law asymptotics– pointing to the stochastic background of the underlying process– may be interpreted as a kind of self-averaging in the system.  >>️

Taras Holovatch, Yuri Kozitsky, et al. Effective and asymptotic scaling in a one-dimensional billiard problem. arXiv: 2503.20476v1 [cond-mat.stat-mech]. Mar 26, 2025.

Also: billiard, random, in https://www.inkgmr.net/kwrds.html 

Keywords: gst, billiard, randomness 

venerdì 4 aprile 2025

# gst: evolution of robust cell differentiation mechanisms under epigenetic feedback


<< In multi-cellular organisms, cells differentiate into multiple types as they divide. States of these cell types, as well as their numbers, are known to be robust to external perturbations; as conceptualized by Waddington's epigenetic landscape where cells embed themselves in valleys corresponding with final cell types. >>

<< How is such robustness achieved by developmental dynamics and evolution? To address this question, (AA) consider a model of cells with gene expression dynamics and epigenetic feedback, governed by a gene regulation network. By evolving the network to achieve more cell types, (They) identified three major differentiation mechanisms exhibiting different properties regarding their variance, attractors, stability, and robustness. >>

<< The first of these mechanisms, type A, exhibits chaos and long-lived oscillatory dynamics that slowly transition until reaching a steady state. The second, type B, follows a channeled annealing process where the epigenetic changes in combination with noise shift the stable landscape of the cells towards varying final cell states. Lastly, type C exhibits a quenching process where cell fate is quickly decided by falling into pre-existing fixed points while cell trajectories are separated through periodic attractors or saddle points. >>

AA << find types A and B to correspond well with Waddington's landscape while being robust. Finally, the dynamics of type B demonstrate a novel method through dimensional reduction of gene-expression states during differentiation. >>

Davey Plugers, Kunihiko Kaneko. Evolution of robust cell differentiation mechanisms under epigenetic feedback. arXiv: 2503.20651v1 [physics.bio-ph]. Mar 26, 2025. 

Also: evolution, noise, in https://www.inkgmr.net/kwrds.html 

Keywords: gst, evolution, noise, epigenetics, epigenetic feedback, differentiation

giovedì 3 aprile 2025

# gst: when a phase transition could be controlled by a fixed point of infinite disorder

AA << apply a real-space block renormalization group approach to study the critical properties of the random transverse-field Ising spin chain with multispin interactions. First (They) recover the known properties of the traditional model with two-spin interactions by applying the renormalization approach for arbitrary size of the block. For the model with three-spin couplings (They) calculate the critical point and demonstrate that the phase transition is controlled by an infinite disorder fixed point. (AA) have determined the typical correlation-length critical exponent, which seems to be different from that of the random transverse Ising chain with nearest-neighbor couplings. Thus this model represents a new infinite disorder universality class. >>️

Ferenc Iglói, Yu-Cheng Lin. Random quantum Ising model with three-spin couplings. arXiv:2503.18690v1 [cond-mat.dis-nn]. Mar 24, 2025.

Also: disorder, order, transition, in https://www.inkgmr.net/kwrds.html 

Keywords: gst, disorder, order, transition

mercoledì 2 aprile 2025

# life: and so the short run matters, by John.


<<  Good Wednesday morning, and happy Liberation Day. This is Jack Blanchard, off to panic-buy Yorkshire Tea and Scotch whisky before the tariffs kick in.  >>️

<<  Fears on the Hill: In particular, the numerous free-traders in the GOP’s ranks on the Hill are feeling pretty darn uncomfortable about what’s coming. Sen. John Kennedy (R-La.) said he hopes the president’s plan is ultimately to use the threat of tariffs to force other nations to strip back their own. “In the long run, [it] will probably work,” he said. “The problem is that in the long run, we’re all dead. And so the short run matters.”  >>

Jack Blanchard. A message to Musk. Politico. Playbook. Apr 02, 2025. 

Also: Mr. Donald, Mr. Vlad, Mr. Chen, RAG-time, triptych, crack, in https://www.inkgmr.net/kwrds.html 

Keywords: life, Mr. Donald, Mr. Vlad, Mr. Chen, RAG-time, triptych, crack


martedì 1 aprile 2025

# epidem: societal self-regulation appears to induce complex infection dynamics and chaos.


<< Classically, endemic infectious diseases are expected to display relatively stable, predictable infection dynamics. Accordingly, basic disease models such as the susceptible-infected-recovered-susceptible model display stable endemic states or recurrent seasonal waves. However, if the human population reacts to high infection numbers by mitigating the spread of the disease, then this delayed behavioral feedback loop can generate infection waves itself, driven by periodic mitigation and subsequent relaxation. >>

AA << show that such behavioral reactions, together with a seasonal effect of comparable impact, can cause complex and unpredictable infection dynamics, including Arnold tongues, coexisting attractors, and chaos. >>

<< Importantly, these arise in epidemiologically relevant parameter regions where the costs associated to infections and mitigation are jointly minimized. By comparing (Their) model to data, (AA) find signs that COVID-19 was mitigated in a way that favored complex infection dynamics. (AA)  results challenge the intuition that endemic disease dynamics necessarily implies predictability and seasonal waves and show the emergence of complex infection dynamics when humans optimize their reaction to increasing infection numbers. >>️

Joel Wagner, Simon Bauer, et al.  Societal self-regulation induces complex infection dynamics and chaos. Phys. Rev. Research 7, 013308. Mar 24, 2025.

Also: virus, sars* covid* (aka 1or2achoos), waves, chaos, in https://www.inkgmr.net/kwrds.html 

Keywords: epidemiology, virus, sars, covid-19, chaos

lunedì 31 marzo 2025

# gst: synchronization and chaos in complex systems with delayed interactions.


<< Explaining the wide range of dynamics observed in ecological communities is challenging due to the large number of species involved, the complex network of interactions among them, and the influence of multiple environmental variables. >>

AA << consider a general framework to model the dynamics of species-rich communities under the effects of external environmental factors, showing that it naturally leads to delayed interactions between species, and analyze the impact of such memory effects on population dynamics. >>

<< Employing the generalized Lotka-Volterra equations with time delays and random interactions, (AA) characterize the resulting dynamical phases in terms of the statistical properties of community interactions. (Their) findings reveal that memory effects can generate persistent and synchronized oscillations in species abundances in sufficiently competitive communities. This provides an additional explanation for synchronization in large communities, complementing known mechanisms such as predator-prey cycles and environmental periodic variability. >>

<< Furthermore, (AA) show that when reciprocal interactions are negatively correlated, time delays alone can induce chaotic behavior. This suggests that ecological complexity is not a prerequisite for unpredictable population dynamics, as intrinsic memory effects are sufficient to generate long-term fluctuations in species abundances. >>

Francesco Ferraro, Christian Grilletta, et al. Synchronization and chaos in complex ecological communities with delayed interactions. arXiv: 2503.21551v1 [q-bio.PE]. Mar 27, 2025.

Also: pause, silence, random, chaos, network, in https://www.inkgmr.net/kwrds.html 

Keywords: gst, pause, silence, random, chaos, chaotic behavior, network, delay, time delay, delayed interactions, random interactions, memory effect 

sabato 29 marzo 2025

# gst: apropos of multiple delays, transitions to intermittent chaos in quorum sensing-inspired dynamics.

<< This study analyses the dynamical consequences of heterogeneous temporal delays within a quorum sensing-inspired (QS-inspired) system, specifically addressing the differential response kinetics of two subpopulations to signalling molecules. >>️

<< The analysis reveals the critical role of multiple, dissimilar delays in modulating system dynamics and inducing bifurcations. Numerical simulations, conducted in conjunction with analytical results, reveal the emergence of periodic self-sustained oscillations and intermittent chaotic behaviour. These observations emphasise the intricate relationship between temporal heterogeneity and the stability landscape of systems exhibiting QS-inspired dynamics. This interplay highlights the capacity for temporal variations to induce complex dynamical transitions within such systems. >>️

AA << findings show that the presence of multiple delays, particularly when characterised by significant disparities in magnitude, can dramatically alter the system’s stability features and promote the emergence of complex nonlinear oscillatory behaviour. >>️

<< Upon explicitly incorporating distinct delays for different state-components, (AA) have shown how temporal factors can dramatically influence system stability and give rise to a spectrum of complex dynamical behaviours, including intermittent chaos. >>

Anahí Flores, Marcos A. González, Víctor F. Breña-Medina. Transitions to Intermittent Chaos in Quorum Sensing Dynamics. arXiv: 2503.14363v2 [nlin.CD]. Mar 19, 2025.

Also: intermittency, pause, silence, transitionchaos, in https://www.inkgmr.net/kwrds.html 

Keywords: gst, intermittency, pause, silence, transitions, chaos